Heat oven to 400 degrees.
In a bowl mix together cream cheese, goat cheese, garlic, shallot, salt, pepper and chile pepper flakes.
In a small bowl mix together bread crumbs, parmesan cheese and olive oil.
Fill each pepper halve with a spoonful of the cheese mixture. Sprinkle with the bread crumb mixture and place on a baking sheet lined with parchment paper. Bake for 20 minutes or until crumbs are browned.